owain
f927e32853
Backend: - main.py: add ADD COLUMN IF NOT EXISTS migrations for avg_hr_day, max_hr_day, and intraday_hr (JSONB) on health_metrics — these columns were in the model but missing from existing DB instances, silently dropping all avg/max HR data. - models/user.py: add intraday_hr JSON column to HealthMetric. - garmin_connect_sync.py: fetch body composition (weight, BMI, body fat, muscle mass) via get_body_composition() per day, with stats.bodyWeight as fallback. Fetch intraday heart rate via get_heart_rates() and store non-null [epoch_ms, bpm] pairs in intraday_hr. - health.py: add GET /health-metrics/intraday?date=YYYY-MM-DD endpoint that returns the stored intraday_hr array for a specific day. Frontend (HealthPage): - Add IntradayHrChart component: AreaChart rendering the 24-hour HR trace with time-of-day x-axis. - DailySnapshot: show 24-hour HR chart (when intraday data present) above the activity strip; add weight + body fat % to the Heart & HRV card; show max HR alongside avg HR. - HealthPage: query /intraday for the selected day and pass data down. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
350 lines
14 KiB
Python
350 lines
14 KiB
Python
"""
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Garmin Connect sync helpers.
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authenticate_garmin() returns an authenticated client, refreshing the stored
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OAuth token when possible and falling back to email/password re-login.
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sync_activities() downloads new FIT files and queues them for processing.
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sync_wellness() pulls daily stats/sleep/HRV summaries from the JSON API
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and upserts them into health_metrics.
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"""
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import io
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import zipfile
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import logging
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from datetime import date, datetime, timedelta, timezone
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from pathlib import Path
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from typing import Optional, Tuple
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logger = logging.getLogger(__name__)
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# ── Password encryption ─────────────────────────────────────────────────────
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def _fernet():
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import base64, hashlib
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from cryptography.fernet import Fernet
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from app.core.config import settings
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key = base64.urlsafe_b64encode(hashlib.sha256(settings.secret_key.encode()).digest())
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return Fernet(key)
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def encrypt_password(password: str) -> str:
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return _fernet().encrypt(password.encode()).decode()
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def decrypt_password(enc: str) -> str:
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return _fernet().decrypt(enc.encode()).decode()
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# ── Auth ─────────────────────────────────────────────────────────────────────
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def authenticate_garmin(email: str, password_enc: str, token_store: Optional[str]) -> Tuple:
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"""
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Returns (garmin_client, new_token_store_or_None).
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new_token_store is set only when tokens were refreshed/re-created so the
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caller can persist them.
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"""
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import garminconnect
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# Try stored OAuth token first.
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# Use garth.loads() directly (always treats the argument as an inline string).
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# garmin.login(tokenstore=...) dispatches on len>512, treating short tokens as
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# filesystem paths and raising FileNotFoundError on every token-based auth attempt.
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# After loads(), set display_name from the embedded profile — required by
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# get_stats(), get_sleep_data(), and other endpoints that build URLs from it.
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if token_store:
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try:
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garmin = garminconnect.Garmin(
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email=email, password=decrypt_password(password_enc)
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)
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garmin.garth.loads(token_store)
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garmin.display_name = (garmin.garth.profile or {}).get("displayName", "")
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return garmin, None
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except Exception as exc:
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logger.info("Garmin token invalid (%s), re-authenticating", exc)
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# Full login with email + password
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garmin = garminconnect.Garmin(email=email, password=decrypt_password(password_enc))
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garmin.login()
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return garmin, garmin.garth.dumps()
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# ── Activity sync ─────────────────────────────────────────────────────────────
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def sync_activities(garmin, user_id: int, since: Optional[datetime],
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db, file_store_path: str, lookback_days: int = 30) -> int:
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"""
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List activities from Garmin Connect, skip any already in the DB, download
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FIT ZIPs for new ones, and queue them for processing.
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lookback_days controls the start date on every sync:
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-1 → full history back to 2010 on first sync, then incremental (since-1d)
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N → incremental (since-1d) when since is set; else last N days on first sync
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Returns the number of new activities queued.
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"""
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import time
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from app.workers.tasks import process_activity_file
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from app.models.user import Activity
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from sqlalchemy import select, func
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if lookback_days == -1:
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# All-time: full pull on first sync, incremental thereafter
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start_date = (since - timedelta(days=1)).date() if since else date(2010, 1, 1)
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elif since:
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# Incremental: one day overlap to catch any late-arriving activities
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start_date = (since - timedelta(days=1)).date()
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else:
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start_date = date.today() - timedelta(days=max(lookback_days, 1))
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end_date = date.today()
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try:
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activities = garmin.get_activities_by_date(
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start_date.isoformat(), end_date.isoformat()
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)
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except Exception as exc:
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logger.error("Failed to list Garmin activities: %s", exc)
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return 0
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queued = 0
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for act in activities:
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garmin_id = str(act.get("activityId", "")).strip()
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if not garmin_id:
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continue
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# Fast path: already imported via Garmin Connect sync
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existing = db.execute(
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select(Activity).where(Activity.garmin_activity_id == garmin_id)
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).scalar_one_or_none()
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if existing:
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continue
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# Slow-path dedup: activity imported via bulk export (no garmin_activity_id).
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# Check by start_time; stamp the ID so future syncs skip it in the fast path.
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act_start_str = act.get("startTimeLocal") or act.get("startTimeGMT") or ""
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if act_start_str:
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try:
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from datetime import datetime as _dt
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act_start = _dt.fromisoformat(act_start_str.replace("Z", "+00:00"))
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time_match = db.execute(
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select(Activity).where(
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Activity.user_id == user_id,
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func.date(Activity.start_time) == act_start.date(),
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)
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).scalar_one_or_none()
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if time_match:
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if not time_match.garmin_activity_id:
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time_match.garmin_activity_id = garmin_id
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db.commit()
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continue
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except Exception:
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pass # couldn't parse time — fall through to download
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# Download original FIT (Garmin wraps it in a ZIP)
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try:
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zip_bytes = garmin.download_activity(
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int(garmin_id),
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dl_fmt=garmin.ActivityDownloadFormat.ORIGINAL,
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)
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except Exception as exc:
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logger.warning("Failed to download activity %s: %s", garmin_id, exc)
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continue
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# Extract the FIT from the ZIP
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try:
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with zipfile.ZipFile(io.BytesIO(zip_bytes)) as zf:
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fit_names = [n for n in zf.namelist() if n.lower().endswith(".fit")]
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if not fit_names:
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logger.debug("No FIT in ZIP for activity %s", garmin_id)
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continue
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fit_data = zf.read(fit_names[0])
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except Exception as exc:
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logger.warning("Failed to unzip activity %s: %s", garmin_id, exc)
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continue
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# Save to disk and queue
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dest_dir = Path(file_store_path) / str(user_id) / "garmin_connect"
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dest_dir.mkdir(parents=True, exist_ok=True)
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dest = dest_dir / f"{garmin_id}.fit"
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dest.write_bytes(fit_data)
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process_activity_file.delay(str(dest), user_id, "fit", garmin_id)
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queued += 1
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# Brief pause to avoid hammering the Garmin API
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time.sleep(0.5)
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return queued
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# ── Wellness sync ─────────────────────────────────────────────────────────────
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def sync_wellness(garmin, user_id: int, since: Optional[datetime], db,
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lookback_days: int = 90) -> int:
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"""
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Fetch daily stats / sleep / HRV from the Garmin Connect JSON API for each
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day in the window and upsert into health_metrics.
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lookback_days controls the window on every sync:
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-1 → full history back to 2010 on first sync, then incremental (since-1d)
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N → incremental (since-1d) when since is set; else last N days on first sync
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Returns the number of days upserted.
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"""
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from sqlalchemy import text
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if lookback_days == -1:
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start_date = (since - timedelta(days=1)).date() if since else date(2010, 1, 1)
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elif since:
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# Incremental: one day overlap to catch any late-arriving wellness data
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start_date = (since - timedelta(days=1)).date()
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else:
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start_date = date.today() - timedelta(days=max(lookback_days, 1))
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days = (date.today() - start_date).days + 1
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processed = 0
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import time as _time
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for i in range(max(days, 1)):
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day = start_date + timedelta(days=i)
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day_str = day.isoformat()
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stats = _safe(garmin.get_stats, day_str)
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sleep_data = _safe(garmin.get_sleep_data, day_str)
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hrv_data = _safe(garmin.get_hrv_data, day_str)
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# Intraday HR (requires display_name; skip gracefully if absent)
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hr_raw = _safe(garmin.get_heart_rates, day_str) if garmin.display_name else None
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bc_data = _safe(garmin.get_body_composition, day_str, day_str)
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_time.sleep(0.25) # avoid hammering Garmin's wellness API
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row = _parse_day(stats, sleep_data, hrv_data)
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# Weight + body composition from weight service (more reliable than stats)
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if bc_data:
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entries = (bc_data.get("dateWeightList")
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or bc_data.get("allWeightMetrics")
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or bc_data.get("weightList") or [])
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if entries:
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e = entries[0]
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bw = e.get("weight")
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if bw and float(bw) > 0:
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bwf = float(bw)
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_set(row, "weight_kg", round(bwf / 1000 if bwf > 300 else bwf, 2))
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if e.get("bmi"):
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_set(row, "bmi", float(e["bmi"]))
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if e.get("bodyFat"):
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_set(row, "body_fat_pct", float(e["bodyFat"]))
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mm = e.get("muscleMass")
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if mm and float(mm) > 0:
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mmf = float(mm)
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_set(row, "muscle_mass_kg", round(mmf / 1000 if mmf > 300 else mmf, 2))
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# Weight from daily stats as fallback (present when Garmin scale is used)
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if stats and "weight_kg" not in row:
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bw = stats.get("bodyWeight")
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if bw and float(bw) > 0:
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bwf = float(bw)
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_set(row, "weight_kg", round(bwf / 1000 if bwf > 300 else bwf, 2))
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# Intraday heart rate — store non-null [epoch_ms, bpm] pairs
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if hr_raw:
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raw_vals = hr_raw.get("heartRateValues") or []
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intraday = [[int(ts), int(v)] for ts, v in raw_vals if v is not None]
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if intraday:
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row["intraday_hr"] = intraday
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if not row:
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continue
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cols = list(row.keys())
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col_sql = ", ".join(cols)
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val_sql = ", ".join(f":{c}" for c in cols)
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upd_sql = ", ".join(
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# total_calories uses GREATEST so multiple sources don't downgrade
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f"{c} = GREATEST(EXCLUDED.{c}, health_metrics.{c})"
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if c == "total_calories" else
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f"{c} = COALESCE(EXCLUDED.{c}, health_metrics.{c})"
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for c in cols
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)
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params = {"user_id": user_id, "day": day.isoformat()}
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params.update(row)
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db.execute(text(f"""
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INSERT INTO health_metrics (user_id, date, {col_sql})
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VALUES (:user_id, :day, {val_sql})
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ON CONFLICT (user_id, date) DO UPDATE SET {upd_sql}
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"""), params)
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db.commit()
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processed += 1
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return processed
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def _safe(fn, *args):
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try:
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return fn(*args)
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except Exception as exc:
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logger.debug("%s(%s) skipped: %s", fn.__name__, args, exc)
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return None
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def _parse_day(stats, sleep_data, hrv_data) -> dict:
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row = {}
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if stats:
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_set(row, "resting_hr", stats.get("restingHeartRate"))
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_set(row, "avg_hr_day", stats.get("averageHeartRate"))
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_set(row, "max_hr_day", stats.get("maxHeartRate"))
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_set(row, "steps", stats.get("totalSteps"))
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_set(row, "floors_climbed", stats.get("floorsAscended"))
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_set(row, "avg_stress", stats.get("averageStressLevel"))
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active = stats.get("activeKilocalories")
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bmr = stats.get("bmrKilocalories")
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_set(row, "active_calories", active)
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if active and bmr:
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_set(row, "total_calories", float(active) + float(bmr))
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if sleep_data:
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dto = sleep_data.get("dailySleepDTO") or sleep_data
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_set(row, "sleep_duration_s", dto.get("sleepTimeSeconds"))
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_set(row, "sleep_deep_s", dto.get("deepSleepSeconds"))
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_set(row, "sleep_light_s", dto.get("lightSleepSeconds"))
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_set(row, "sleep_rem_s", dto.get("remSleepSeconds"))
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_set(row, "sleep_awake_s", dto.get("awakeSleepSeconds"))
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# Timestamps are milliseconds since epoch in local time
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for key, col in (("sleepStartTimestampLocal", "sleep_start"),
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("sleepEndTimestampLocal", "sleep_end")):
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ms = dto.get(key)
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if ms:
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_set(row, col, datetime.fromtimestamp(ms / 1000, tz=timezone.utc).isoformat())
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# SpO2
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spo2 = dto.get("averageSpO2Value")
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if spo2 and 50 < float(spo2) <= 100:
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row["spo2_avg"] = float(spo2)
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# Sleep score — structure varies across firmware
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scores = sleep_data.get("sleepScores") or sleep_data.get("sleepScore")
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if isinstance(scores, dict):
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overall = scores.get("overall") or scores.get("qualityScore")
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if isinstance(overall, dict):
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_set(row, "sleep_score", overall.get("value"))
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else:
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_set(row, "sleep_score", overall)
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elif isinstance(scores, (int, float)):
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row["sleep_score"] = scores
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if hrv_data:
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summary = hrv_data.get("hrvSummary") or hrv_data
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_set(row, "hrv_nightly_avg", summary.get("lastNight") or summary.get("lastNightAvg"))
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_set(row, "hrv_5min_high", summary.get("lastNight5MinHigh"))
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status = summary.get("status")
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if status:
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row["hrv_status"] = str(status).lower()
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return row
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def _set(d: dict, key: str, val):
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if val is not None:
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d[key] = val
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